STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2168acyl-CoA dehydrogenase. (357 aa)    
Predicted Functional Partners:
BkdB
Branched-chain alpha-keto acid dehydrogenase subunit E2.
  
 0.943
RMCT_2167
acyl-CoA dehydrogenase domain-containing protein.
 
     0.942
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.922
RMCT_1476
Acyl CoA dehydrogenase.
     
  0.900
EchA8_25
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.857
RMCT_1668
acetyl-CoA acetyltransferase.
  
 0.857
RMCT_3589
enoyl-CoA hydratase EchA17.
  
 0.857
EchA8_16
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.856
RMCT_0916
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.856
PcaF_1
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.846
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.