Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
KshA_7Iron-sulfur cluster-binding protein, Rieske family protein. (322 aa)    
Predicted Functional Partners:
RMCT_2169
TetR family transcriptional regulator.
 
   
 0.825
AndAd
Aromatic-ring-hydroxylating dioxygenase, beta subunit.
  
 
 0.659
AntB
Beta subunit of hydroxylase component of benzoate 1,2-dioxygenase.
  
 
 0.659
RMCT_2171
Uncharacterized protein.
       0.572
RMCT_4524
Amidohydrolase.
 
   
 0.431
HsaC
Biphenyl-2,3-diol-1,2-dioxygenase bphC.
 
   
 0.419
RMCT_4630
Amidohydrolase.
 
   
 0.414
BphC
Extradiol dioxygenase, type I.
 
  
 0.404
Hmp_2
3-ketosteroid 9alpha-hydroxylase component KshB.
 
  
 0.402
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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