Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_2179methylmalonyl-CoA epimerase. (159 aa)    
Predicted Functional Partners:
ScpA_2
Cobalamin B12-binding domain-containing protein.
  
 0.997
MutB
methylmalonyl-CoA mutase.
 
  
 0.982
ScpA_3
methylmalonyl-CoA mutase family protein.
 
  
 0.980
MutA
methylmalonyl-CoA mutase small subunit mutA.
 
  
 0.980
AccD5_1
propionyl-CoA carboxylase beta subunit 5 accD5.
 
 
 0.962
AccD6
propionyl-CoA carboxylase beta subunit 6 accD6.
 
 
 0.953
AccC_2
Bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha subunit accA3: biotin carboxylase + biotin carboxyl carrier protein.
  
 
 0.914
RMCT_2273
Hypothetical protein.
     
  0.900
RMCT_2222
LAO/AO transport system ATPase.
  
 0.876
RMCT_4373
Arginine/ornithine transport system ATPase.
  
 0.810
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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