Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GlgA_2 | Mak1 | RMCT_2845 | RMCT_1269 | Glycosyltransferase. | Uncharacterized protein. | 0.986 |
GlgA_2 | MalQ | RMCT_2845 | RMCT_0392 | Glycosyltransferase. | 4-alpha-glucanotransferase. | 0.941 |
GlgA_2 | RMCT_2185 | RMCT_2845 | RMCT_2185 | Glycosyltransferase. | Glycogen phosphorylase glgP. | 0.987 |
GlgA_2 | TreS | RMCT_2845 | RMCT_1270 | Glycosyltransferase. | Trehalose synthase treS. | 0.862 |
GlgA_2 | TreY | RMCT_2845 | RMCT_4404 | Glycosyltransferase. | Maltooligosyltrehalose synthase treY. | 0.634 |
GlgA_2 | TreZ | RMCT_2845 | RMCT_4403 | Glycosyltransferase. | Maltooligosyltrehalose trehalohydrolase treZ. | 0.971 |
GlgA_2 | glgB | RMCT_2845 | RMCT_2183 | Glycosyltransferase. | Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.984 |
GlgA_2 | glgC | RMCT_2845 | RMCT_2844 | Glycosyltransferase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.996 |
GlgA_2 | glgE | RMCT_2845 | RMCT_2184 | Glycosyltransferase. | Glucanase glgE; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.994 |
Mak1 | GlgA_2 | RMCT_1269 | RMCT_2845 | Uncharacterized protein. | Glycosyltransferase. | 0.986 |
Mak1 | MalQ | RMCT_1269 | RMCT_0392 | Uncharacterized protein. | 4-alpha-glucanotransferase. | 0.976 |
Mak1 | RMCT_2185 | RMCT_1269 | RMCT_2185 | Uncharacterized protein. | Glycogen phosphorylase glgP. | 0.849 |
Mak1 | TreS | RMCT_1269 | RMCT_1270 | Uncharacterized protein. | Trehalose synthase treS. | 0.999 |
Mak1 | TreY | RMCT_1269 | RMCT_4404 | Uncharacterized protein. | Maltooligosyltrehalose synthase treY. | 0.932 |
Mak1 | TreZ | RMCT_1269 | RMCT_4403 | Uncharacterized protein. | Maltooligosyltrehalose trehalohydrolase treZ. | 0.959 |
Mak1 | glgB | RMCT_1269 | RMCT_2183 | Uncharacterized protein. | Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.990 |
Mak1 | glgC | RMCT_1269 | RMCT_2844 | Uncharacterized protein. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.834 |
Mak1 | glgE | RMCT_1269 | RMCT_2184 | Uncharacterized protein. | Glucanase glgE; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.998 |
MalQ | GlgA_2 | RMCT_0392 | RMCT_2845 | 4-alpha-glucanotransferase. | Glycosyltransferase. | 0.941 |
MalQ | Mak1 | RMCT_0392 | RMCT_1269 | 4-alpha-glucanotransferase. | Uncharacterized protein. | 0.976 |
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