Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Frc_13L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (333 aa)    
Predicted Functional Partners:
Frc_21
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
     0.774
Frc_1
Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family.
  
     0.773
ScpA_3
methylmalonyl-CoA mutase family protein.
     
 0.655
ScpA_2
Cobalamin B12-binding domain-containing protein.
     
 0.655
RMCT_2254
acyl-CoA dehydrogenase.
 
 
 0.554
Oxc
Thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
  
 
 0.521
IlvG
Acetolactate synthase; Belongs to the TPP enzyme family.
  
 
 0.521
IlvB1
Acetolactate synthase 1 catalytic subunit.
  
 
 0.521
BznB
Thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family.
  
 
 0.521
RMCT_2213
F420-dependent oxidoreductase, MSMEG_4879 family.
       0.512
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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