STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaiA_5acyl-CoA dehydrogenase. (275 aa)    
Predicted Functional Partners:
RMCT_2218
acyl-CoA dehydrogenase.
 
     0.906
EchA8_21
enoyl-CoA hydratase/isomerase.
 
 0.892
FadK_11
AMP-dependent synthetase and ligase.
  
  
 0.830
EchA8_11
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.770
RMCT_0980
acyl-CoA dehydrogenase.
  
     0.750
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.745
EchA8_9
enoyl-CoA hydratase/isomerase.
 
 0.743
CaiA_4
acyl-CoA dehydrogenase.
  
     0.740
EchA8_10
enoyl-CoA hydratase/isomerase.
 
 0.738
BbsG_5
acyl-CoA dehydrogenase.
  
     0.738
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.