Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Azo1 | FabG3_1 | RMCT_2234 | RMCT_2236 | NADPH-dependent FMN reductase. | Dehydrogenase. | 0.781 |
Azo1 | HsaD_2 | RMCT_2234 | RMCT_2227 | NADPH-dependent FMN reductase. | Alpha/beta hydrolase fold protein. | 0.790 |
Azo1 | HsdA_5 | RMCT_2234 | RMCT_2232 | NADPH-dependent FMN reductase. | 3-alpha-hydroxysteroid dehydrogenase. | 0.852 |
Azo1 | KstD_4 | RMCT_2234 | RMCT_2230 | NADPH-dependent FMN reductase. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.760 |
Azo1 | LimB_4 | RMCT_2234 | RMCT_2231 | NADPH-dependent FMN reductase. | Luciferase family protein. | 0.889 |
Azo1 | RMCT_2233 | RMCT_2234 | RMCT_2233 | NADPH-dependent FMN reductase. | Cyclase. | 0.883 |
Azo1 | XylF | RMCT_2234 | RMCT_2235 | NADPH-dependent FMN reductase. | Alpha/beta hydrolase fold protein. | 0.872 |
Azo1 | mhpA | RMCT_2234 | RMCT_2228 | NADPH-dependent FMN reductase. | 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; Catalyzes the insertion of one atom of molecular oxygen into position 2 of the phenyl ring of 3-(3-hydroxyphenyl)propionate (3-HPP) and hydroxycinnamic acid (3HCI). | 0.677 |
Azo1 | mhpB | RMCT_2234 | RMCT_2229 | NADPH-dependent FMN reductase. | 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family. | 0.795 |
FabG3_1 | Azo1 | RMCT_2236 | RMCT_2234 | Dehydrogenase. | NADPH-dependent FMN reductase. | 0.781 |
FabG3_1 | HsaD_2 | RMCT_2236 | RMCT_2227 | Dehydrogenase. | Alpha/beta hydrolase fold protein. | 0.642 |
FabG3_1 | HsdA_5 | RMCT_2236 | RMCT_2232 | Dehydrogenase. | 3-alpha-hydroxysteroid dehydrogenase. | 0.821 |
FabG3_1 | KstD_4 | RMCT_2236 | RMCT_2230 | Dehydrogenase. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.574 |
FabG3_1 | LimB_4 | RMCT_2236 | RMCT_2231 | Dehydrogenase. | Luciferase family protein. | 0.625 |
FabG3_1 | RMCT_2233 | RMCT_2236 | RMCT_2233 | Dehydrogenase. | Cyclase. | 0.828 |
FabG3_1 | XylF | RMCT_2236 | RMCT_2235 | Dehydrogenase. | Alpha/beta hydrolase fold protein. | 0.842 |
FabG3_1 | mhpA | RMCT_2236 | RMCT_2228 | Dehydrogenase. | 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; Catalyzes the insertion of one atom of molecular oxygen into position 2 of the phenyl ring of 3-(3-hydroxyphenyl)propionate (3-HPP) and hydroxycinnamic acid (3HCI). | 0.570 |
FabG3_1 | mhpB | RMCT_2236 | RMCT_2229 | Dehydrogenase. | 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family. | 0.547 |
HsaD_2 | Azo1 | RMCT_2227 | RMCT_2234 | Alpha/beta hydrolase fold protein. | NADPH-dependent FMN reductase. | 0.790 |
HsaD_2 | FabG3_1 | RMCT_2227 | RMCT_2236 | Alpha/beta hydrolase fold protein. | Dehydrogenase. | 0.642 |
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