Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HsaD_2 | KstD_4 | RMCT_2227 | RMCT_2230 | Alpha/beta hydrolase fold protein. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.908 |
HsaD_2 | LimB_4 | RMCT_2227 | RMCT_2231 | Alpha/beta hydrolase fold protein. | Luciferase family protein. | 0.809 |
HsaD_2 | mhpB | RMCT_2227 | RMCT_2229 | Alpha/beta hydrolase fold protein. | 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase; Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3-dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2-hydroxy-6- ketononatrienedioate, respectively; Belongs to the LigB/MhpB extradiol dioxygenase family. | 0.997 |
IfcA_1 | IfcA_2 | RMCT_0470 | RMCT_0385 | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | Flavoprotein. | 0.922 |
IfcA_1 | Kgd | RMCT_0470 | RMCT_2818 | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | Alpha-ketoglutarate decarboxylase. | 0.836 |
IfcA_1 | Ksi_2 | RMCT_0470 | RMCT_1469 | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | Steroid delta-isomerase. | 0.943 |
IfcA_1 | KstD_4 | RMCT_0470 | RMCT_2230 | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.933 |
IfcA_1 | RMCT_0639 | RMCT_0470 | RMCT_0639 | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | Succinate dehydrogenase. | 0.855 |
IfcA_1 | RMCT_1886 | RMCT_0470 | RMCT_1886 | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | Nuclear transport factor 2. | 0.925 |
IfcA_1 | SdhB | RMCT_0470 | RMCT_0636 | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | Succinate dehydrogenase iron-sulfur subunit. | 0.830 |
IfcA_2 | IfcA_1 | RMCT_0385 | RMCT_0470 | Flavoprotein. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.922 |
IfcA_2 | Kgd | RMCT_0385 | RMCT_2818 | Flavoprotein. | Alpha-ketoglutarate decarboxylase. | 0.836 |
IfcA_2 | Ksi_2 | RMCT_0385 | RMCT_1469 | Flavoprotein. | Steroid delta-isomerase. | 0.949 |
IfcA_2 | KstD_4 | RMCT_0385 | RMCT_2230 | Flavoprotein. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.935 |
IfcA_2 | RMCT_0639 | RMCT_0385 | RMCT_0639 | Flavoprotein. | Succinate dehydrogenase. | 0.855 |
IfcA_2 | RMCT_1886 | RMCT_0385 | RMCT_1886 | Flavoprotein. | Nuclear transport factor 2. | 0.940 |
IfcA_2 | SdhB | RMCT_0385 | RMCT_0636 | Flavoprotein. | Succinate dehydrogenase iron-sulfur subunit. | 0.830 |
Kgd | IfcA_1 | RMCT_2818 | RMCT_0470 | Alpha-ketoglutarate decarboxylase. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.836 |
Kgd | IfcA_2 | RMCT_2818 | RMCT_0385 | Alpha-ketoglutarate decarboxylase. | Flavoprotein. | 0.836 |
Kgd | KstD_4 | RMCT_2818 | RMCT_2230 | Alpha-ketoglutarate decarboxylase. | Succinate dehydrogenase/fumarate reductase flavoprotein subunit. | 0.836 |
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