Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_2240Cytochrome P450-SU2. (415 aa)    
Predicted Functional Partners:
SubB_3
Ferredoxin.
 
  
 0.943
MenB_2
enoyl-CoA hydratase/carnithine racemase.
 
 
   0.845
RMCT_2238
TetR family transcriptional regulator.
 
   
 0.835
RMCT_2241
Amidohydrolase.
  
    0.803
RMCT_2243
Peptidase, M24 family protein.
       0.801
PpsA_2
Beta-ketoacyl synthase.
  
 0.704
FadD_15
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
  0.703
RMCT_2242
Peptidase, M24 family protein.
       0.680
Frc_12
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.677
EryA_1
Acyl transferase domain-containing protein.
 
 0.651
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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