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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FabG_19Dehydrogenase. (271 aa)    
Predicted Functional Partners:
KasA_2
Fatty acid synthase.
  
 0.977
RMCT_2246
Putative uncharacterized protein.
  
 
 0.812
MenB_2
enoyl-CoA hydratase/carnithine racemase.
  
 0.809
FadD_15
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.804
RMCT_2241
Amidohydrolase.
 
    0.794
RMCT_2243
Peptidase, M24 family protein.
  
 
 0.787
YcdF_4
Short-chain dehydrogenase/reductase SDR.
  
     0.754
Lvr_5
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.749
RMCT_3938
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.744
FabH_2
3-oxoacyl-(acyl-carrier-protein) synthase III.
  
 
 0.738
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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