Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CaiA_4acyl-CoA dehydrogenase. (379 aa)    
Predicted Functional Partners:
RMCT_2254
acyl-CoA dehydrogenase.
 
     0.934
HcaE_2
Rieske (2Fe-2S) domain-containing protein.
 
     0.882
RMCT_2257
Amidohydrolase.
  
    0.869
RMCT_2256
Putative uncharacterized protein.
       0.868
RMCT_2258
Xaa-Pro dipeptidase.
       0.868
RMCT_2260
Carboxymuconolactone decarboxylase.
 
  
 0.801
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.787
RMCT_3706
acyl-CoA dehydrogenase.
  
     0.771
RMCT_0981
acyl-CoA dehydrogenase.
  
     0.770
RMCT_4639
acyl-CoA dehydrogenase protein.
 
     0.766
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.