Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
RMCT_2260Carboxymuconolactone decarboxylase. (186 aa)    
Predicted Functional Partners:
RMCT_3292
Carboxymuconolactone decarboxylase.
  
 
 0.917
CatD_2
Alpha/beta hydrolase fold protein.
  
 
 0.912
RMCT_1875
Gamma-carboxymuconolactone decarboxylase subunit like protein.
    
 0.910
RMCT_0998
Carboxymuconolactone decarboxylase.
  
  
 
0.904
HcaE_2
Rieske (2Fe-2S) domain-containing protein.
 
     0.821
CaiA_4
acyl-CoA dehydrogenase.
 
  
 0.801
RMCT_2254
acyl-CoA dehydrogenase.
 
  
 0.797
RMCT_2256
Putative uncharacterized protein.
       0.764
RMCT_2258
Xaa-Pro dipeptidase.
       0.764
RMCT_2257
Amidohydrolase.
       0.762
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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