STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2276Transmembrane protein. (172 aa)    
Predicted Functional Partners:
BirA
biotin--acetyl-CoA-carboxylase ligase.
       0.828
RMCT_2273
Hypothetical protein.
       0.713
AccD5_1
propionyl-CoA carboxylase beta subunit 5 accD5.
       0.713
Maf
Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.677
RMCT_2689
Membrane flanked domain-containing protein.
  
  
 0.613
RMCT_0741
35 kDa alanine rich protein.
 
    0.562
RMCT_0899
Protein of unknown function.
  
    0.549
RMCT_2828
Transmembrane protein.
 
    0.523
RMCT_3852
Putative uncharacterized protein.
  
     0.469
CobN
Cobalamin biosynthesis protein cobN.
  
  
 0.466
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.