Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AccD5_1 | BirA | RMCT_2274 | RMCT_2275 | propionyl-CoA carboxylase beta subunit 5 accD5. | biotin--acetyl-CoA-carboxylase ligase. | 0.944 |
AccD5_1 | Maf | RMCT_2274 | RMCT_2272 | propionyl-CoA carboxylase beta subunit 5 accD5. | Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.878 |
AccD5_1 | RMCT_2273 | RMCT_2274 | RMCT_2273 | propionyl-CoA carboxylase beta subunit 5 accD5. | Hypothetical protein. | 0.997 |
AccD5_1 | RMCT_2276 | RMCT_2274 | RMCT_2276 | propionyl-CoA carboxylase beta subunit 5 accD5. | Transmembrane protein. | 0.747 |
BirA | AccD5_1 | RMCT_2275 | RMCT_2274 | biotin--acetyl-CoA-carboxylase ligase. | propionyl-CoA carboxylase beta subunit 5 accD5. | 0.944 |
BirA | Maf | RMCT_2275 | RMCT_2272 | biotin--acetyl-CoA-carboxylase ligase. | Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.755 |
BirA | RMCT_2273 | RMCT_2275 | RMCT_2273 | biotin--acetyl-CoA-carboxylase ligase. | Hypothetical protein. | 0.863 |
BirA | RMCT_2276 | RMCT_2275 | RMCT_2276 | biotin--acetyl-CoA-carboxylase ligase. | Transmembrane protein. | 0.849 |
Maf | AccD5_1 | RMCT_2272 | RMCT_2274 | Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | propionyl-CoA carboxylase beta subunit 5 accD5. | 0.878 |
Maf | BirA | RMCT_2272 | RMCT_2275 | Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | biotin--acetyl-CoA-carboxylase ligase. | 0.755 |
Maf | RMCT_2273 | RMCT_2272 | RMCT_2273 | Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Hypothetical protein. | 0.869 |
Maf | RMCT_2276 | RMCT_2272 | RMCT_2276 | Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Transmembrane protein. | 0.714 |
RMCT_0741 | RMCT_0899 | RMCT_0741 | RMCT_0899 | 35 kDa alanine rich protein. | Protein of unknown function. | 0.817 |
RMCT_0741 | RMCT_2276 | RMCT_0741 | RMCT_2276 | 35 kDa alanine rich protein. | Transmembrane protein. | 0.583 |
RMCT_0741 | RMCT_2837 | RMCT_0741 | RMCT_2837 | 35 kDa alanine rich protein. | RNA polymerase sigma-70 factor. | 0.477 |
RMCT_0899 | RMCT_0741 | RMCT_0899 | RMCT_0741 | Protein of unknown function. | 35 kDa alanine rich protein. | 0.817 |
RMCT_0899 | RMCT_2276 | RMCT_0899 | RMCT_2276 | Protein of unknown function. | Transmembrane protein. | 0.565 |
RMCT_0899 | RMCT_2837 | RMCT_0899 | RMCT_2837 | Protein of unknown function. | RNA polymerase sigma-70 factor. | 0.775 |
RMCT_2273 | AccD5_1 | RMCT_2273 | RMCT_2274 | Hypothetical protein. | propionyl-CoA carboxylase beta subunit 5 accD5. | 0.997 |
RMCT_2273 | BirA | RMCT_2273 | RMCT_2275 | Hypothetical protein. | biotin--acetyl-CoA-carboxylase ligase. | 0.863 |
page 1 of 2