Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCT_2281TIGR03089 family protein. (238 aa)    
Predicted Functional Partners:
Pks2
Polyketide synthase pks5.
  
 0.907
PpsA_2
Beta-ketoacyl synthase.
  
 0.808
EryA_1
Acyl transferase domain-containing protein.
  
 0.804
MsrR_1
CPSA-related protein.
  
    0.784
RMCT_3126
Protein of unknown function.
  
     0.711
PpsA_7
Polyketide synthase pks13.
  
 0.711
RmlD
dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
     
 0.686
GlgC_1
Nucleoside-diphosphate-sugar pyrophosphorylase family protein.
   
 
 0.676
WbbL
dTDP-RHA:A-D-GlcNAc-diphosphoryl polyprenol-A-3-L-rhamnosyl transferase wbbL1.
     
 0.656
BcrC
Sphingosine/diacylglycerol kinase-like enzyme.
 
 
 0.645
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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