Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_2300TetR family transcriptional regulator. (206 aa)    
Predicted Functional Partners:
AlkB1
Transmembrane alkane 1-monooxygenase AlkB.
 
  
 0.824
RubA
Rubredoxin RubB.
       0.740
RMCT_1760
P-aminobenzoate N-oxygenase AurF.
 
     0.730
AlkG
Rubredoxin; Belongs to the rubredoxin family.
       0.681
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.640
CyaB_2
Adenylate cyclase.
 
   
 0.620
EccB1_2
Type VII secretion protein EccB, Actinobacterial.
  
   
 0.617
RMCT_1387
Lipoprotein lprB.
  
   
 0.612
RMCT_4662
Transmembrane protein.
 
     0.591
RMCT_2302
Secretory lipase.
       0.579
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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