STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2302Secretory lipase. (400 aa)    
Predicted Functional Partners:
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.788
RMCT_4221
Putative uncharacterized protein.
  
  
 0.723
RMCT_2303
Triacylglycerol lipase.
 
    
0.651
RMCT_0209
Protein of unknown function.
 
 
   0.614
RMCT_2300
TetR family transcriptional regulator.
       0.577
RubA
Rubredoxin RubB.
  
    0.571
RMCT_4448
Putative uncharacterized protein.
 
     0.517
RMCT_2047
ATPase.
 
     0.505
RMCT_2304
TPR repeat protein.
  
  
 0.504
RMCT_0418
Cutinase.
  
    0.494
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.