STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PhoRTwo component system sensor transduction histidine kinase mtrB. (554 aa)    
Predicted Functional Partners:
MtrA
Two component system sensor transduction transcriptional regulatory protein mtrA.
 0.999
lpqB
Lipoprotein LpqB.
 
  
 0.921
RMCT_4559
Stage II sporulation protein E.
 
 
 0.909
PrrA
Two component transcriptional regulator.
 
 0.894
RegX3
Two component system sensor transduction protein regX3.
 
 0.890
MprA
Two component response transcriptional regulatory protein MprA.
 
 0.885
AcoB
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit.
  
 0.871
CopR
Two-component system response regulator.
 
 0.862
TcrA
Two-component system response regulator.
 
 0.835
WalR
Transcriptional regulator.
 
 
 0.763
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.