STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PdtaSTwo component sensor kinase. (494 aa)    
Predicted Functional Partners:
PdtaR
Two component system transcriptional regulator.
   
 0.917
RMCT_2332
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit.
       0.846
whiB-5
Transcriptional regulatory protein whib-like whiB1; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
   
 0.658
RMCT_4559
Stage II sporulation protein E.
     
 0.641
RMCT_2613
Transmembrane protein.
   
    0.580
Cph1
Two-component system sensor kinase.
     
 0.578
whiB-4
Transcriptional regulatory protein whib-like whiB2; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.573
RMCT_4220
Protein of unknown function.
 
     0.560
RMCT_0374
MerR family transcriptional regulator.
  
   
 0.555
Cya_1
Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
     
 0.554
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.