Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_2343Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA. (234 aa)    
Predicted Functional Partners:
OphA1_1
Ferredoxin.
  
 
 0.580
Hmp_2
3-ketosteroid 9alpha-hydroxylase component KshB.
  
 
 0.580
OphA1_2
Phthalate 4,5-dioxygenase reductase subunit.
  
 
 0.580
Hmp_3
Ferredoxin.
  
 
 0.580
Hmp_4
Ferredoxin.
  
 
 0.580
RMCT_2320
Oxidoreductase.
  
 
 0.580
Hmp_6
Hemoglobine-related protein hmp.
  
 
 0.580
Hmp_5
Ferredoxin.
  
 
 0.580
RMCT_3162
Metal-sulfur cluster biosynthetic protein.
  
  
 0.569
RMCT_2341
Conserved protein of unknown function.
 
     0.562
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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