Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KchTransmembrane cation transporter. (359 aa)    
Predicted Functional Partners:
NudC
NADH pyrophosphatase.
       0.830
PcrA_1
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
  
  
 0.741
PcrA_2
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
  
  
 0.741
RsmB
Fmu protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.692
RMCT_1677
Chorismate mutase.
 
   
 0.548
nusB
Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
 
 0.538
DhaA_1
Lipase lipV.
     
 0.511
CysG_1
uroporphyrin-III C-methyltransferase hemD.
  
  
 0.502
Mog
Molybdopterin biosynthesis protein mog.
  
    0.499
RMCT_4397
Possible transcriptional regulatory protein.
  
  
 0.499
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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