STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaiA_2Short/branched chain specific acyl-CoA dehydrogenase. (376 aa)    
Predicted Functional Partners:
RMCT_2369
Lipid-transfer protein.
  
 0.939
RMCT_2370
Acyl dehydratase.
 
 0.939
Frc_17
alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.
  
 
 0.934
RMCT_2373
Putative uncharacterized protein.
 
  
 0.914
RMCT_0409
acyl-CoA synthetase.
  
 
 0.913
RMCT_1925
fatty-acid--CoA ligase.
  
 
 0.913
RMCT_3403
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.913
RMCT_3418
acyl-CoA synthetase.
  
 
 0.913
RMCT_2374
isovaleryl-CoA dehydrogenase.
 
    
0.886
EnvR_1
TetR family transcriptional regulator.
 
     0.883
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.