STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2383Amidohydrolase. (396 aa)    
Predicted Functional Partners:
RMCT_2385
isovaleryl-CoA dehydrogenase 1.
 
     0.869
FadK_6
short-chain-fatty-acid--CoA ligase.
 
    0.867
RMCT_2384
acyl-CoA dehydrogenase.
 
     0.837
RMCT_2415
Receptor ligand binding region family protein.
 
     0.776
RMCT_2392
Putative uncharacterized protein.
 
    0.761
RMCT_2241
Amidohydrolase.
  
     0.757
RMCT_2150
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.752
RMCT_2404
Transcriptional regulator.
 
     0.748
RMCT_3427
Amidohydrolase.
  
     0.724
RMCT_0982
Amidohydrolase.
  
     0.721
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.