Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_2385isovaleryl-CoA dehydrogenase 1. (399 aa)    
Predicted Functional Partners:
RMCT_2384
acyl-CoA dehydrogenase.
     0.949
RMCT_2383
Amidohydrolase.
 
     0.868
FadK_6
short-chain-fatty-acid--CoA ligase.
 
  
 0.834
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.787
CaiA_2
Short/branched chain specific acyl-CoA dehydrogenase.
  
     0.767
RMCT_4639
acyl-CoA dehydrogenase protein.
  
     0.752
RMCT_3706
acyl-CoA dehydrogenase.
  
     0.742
RMCT_2501
acyl-CoA dehydrogenase FadE34.
 
     0.741
RMCT_4190
acyl-CoA dehydrogenase protein.
  
     0.734
RMCT_1620
acyl-CoA dehydrogenase.
  
     0.730
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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