Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FadD_7AMP-dependent synthetase and ligase. (485 aa)    
Predicted Functional Partners:
KasA_2
Fatty acid synthase.
  
 
 0.922
Pks2
Polyketide synthase pks5.
  
 0.908
CaiD_4
enoyl-CoA hydratase/carnithine racemase.
  
 
 0.904
EchA8_7
enoyl-CoA hydratase/carnithine racemase.
 
   0.885
EchA8_6
enoyl-CoA hydratase/carnithine racemase.
 
 
 0.881
RMCT_2392
Putative uncharacterized protein.
 
   
 0.872
AccD6
propionyl-CoA carboxylase beta subunit 6 accD6.
  
 0.871
AccC_2
Bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha subunit accA3: biotin carboxylase + biotin carboxyl carrier protein.
  
 
 0.842
RMCT_2390
acyl-CoA dehydrogenase.
 
  
 0.830
YtpA
Lysophospholipase.
    
 0.816
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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