Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CaiD_4 | EchA8_19 | RMCT_2391 | RMCT_0954 | enoyl-CoA hydratase/carnithine racemase. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.797 |
CaiD_4 | EchA8_6 | RMCT_2391 | RMCT_2388 | enoyl-CoA hydratase/carnithine racemase. | enoyl-CoA hydratase/carnithine racemase. | 0.969 |
CaiD_4 | EchA8_7 | RMCT_2391 | RMCT_2389 | enoyl-CoA hydratase/carnithine racemase. | enoyl-CoA hydratase/carnithine racemase. | 0.915 |
CaiD_4 | FadD_7 | RMCT_2391 | RMCT_2387 | enoyl-CoA hydratase/carnithine racemase. | AMP-dependent synthetase and ligase. | 0.924 |
CaiD_4 | KasA_2 | RMCT_2391 | RMCT_0942 | enoyl-CoA hydratase/carnithine racemase. | Fatty acid synthase. | 0.750 |
CaiD_4 | RMCT_0339 | RMCT_2391 | RMCT_0339 | enoyl-CoA hydratase/carnithine racemase. | acetyl-CoA acetyltransferase. | 0.739 |
CaiD_4 | RMCT_0852 | RMCT_2391 | RMCT_0852 | enoyl-CoA hydratase/carnithine racemase. | Lipid-transfer protein. | 0.756 |
CaiD_4 | RMCT_2390 | RMCT_2391 | RMCT_2390 | enoyl-CoA hydratase/carnithine racemase. | acyl-CoA dehydrogenase. | 0.929 |
CaiD_4 | RMCT_2392 | RMCT_2391 | RMCT_2392 | enoyl-CoA hydratase/carnithine racemase. | Putative uncharacterized protein. | 0.924 |
CaiD_4 | RMCT_3589 | RMCT_2391 | RMCT_3589 | enoyl-CoA hydratase/carnithine racemase. | enoyl-CoA hydratase EchA17. | 0.923 |
EchA8_19 | CaiD_4 | RMCT_0954 | RMCT_2391 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | enoyl-CoA hydratase/carnithine racemase. | 0.797 |
EchA8_19 | EchA8_7 | RMCT_0954 | RMCT_2389 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | enoyl-CoA hydratase/carnithine racemase. | 0.771 |
EchA8_19 | FadD_7 | RMCT_0954 | RMCT_2387 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | AMP-dependent synthetase and ligase. | 0.402 |
EchA8_19 | KasA_2 | RMCT_0954 | RMCT_0942 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty acid synthase. | 0.750 |
EchA8_19 | RMCT_0339 | RMCT_0954 | RMCT_0339 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA acetyltransferase. | 0.739 |
EchA8_19 | RMCT_0852 | RMCT_0954 | RMCT_0852 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Lipid-transfer protein. | 0.756 |
EchA8_19 | RMCT_2390 | RMCT_0954 | RMCT_2390 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.698 |
EchA8_19 | RMCT_2392 | RMCT_0954 | RMCT_2392 | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Putative uncharacterized protein. | 0.623 |
EchA8_6 | CaiD_4 | RMCT_2388 | RMCT_2391 | enoyl-CoA hydratase/carnithine racemase. | enoyl-CoA hydratase/carnithine racemase. | 0.969 |
EchA8_6 | EchA8_7 | RMCT_2388 | RMCT_2389 | enoyl-CoA hydratase/carnithine racemase. | enoyl-CoA hydratase/carnithine racemase. | 0.808 |
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