STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2399Taurine catabolism dioxygenase TauD, TfdA family. (369 aa)    
Predicted Functional Partners:
GhrB
Phosphoglycerate dehydrogenase-like oxidoreductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.925
CaiD_5
enoyl-CoA hydratase/isomerase family protein.
 
  
 0.913
GarL
hpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
     0.789
RMCT_2404
Transcriptional regulator.
 
   
 0.748
RMCT_2415
Receptor ligand binding region family protein.
  
     0.728
Rmt3
macrocin-O-methyltransferase.
 
    0.706
RMCT_1338
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.704
RMCT_2383
Amidohydrolase.
 
     0.690
PolS_1
Short-chain dehydrogenase/reductase SDR.
 
   
 0.673
RMCT_2402
Putative uncharacterized protein.
       0.658
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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