STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2404Transcriptional regulator. (270 aa)    
Predicted Functional Partners:
RMCT_2383
Amidohydrolase.
 
     0.748
RMCT_2399
Taurine catabolism dioxygenase TauD, TfdA family.
 
   
 0.748
RMCT_2415
Receptor ligand binding region family protein.
 
     0.744
RMCT_1338
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.714
EnvR_1
TetR family transcriptional regulator.
  
     0.682
PolS_1
Short-chain dehydrogenase/reductase SDR.
 
     0.678
RMCT_2403
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase.
 
     0.675
RMCT_0194
Aminoglycoside phosphotransferase.
 
     0.669
RMCT_1334
Putative uncharacterized protein.
 
     0.654
RMCT_4242
TetR family transcriptional regulator.
  
     0.654
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.