Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BaiE_1 | RMCT_1886 | RMCT_4056 | RMCT_1886 | Hypothetical protein. | Nuclear transport factor 2. | 0.735 |
BaiE_1 | RMCT_2410 | RMCT_4056 | RMCT_2410 | Hypothetical protein. | Dihydrodipicolinate reductase N-terminus domain-containing protein. | 0.507 |
FcbB2_3 | Nox_2 | RMCT_2408 | RMCT_2411 | enoyl-CoA hydratase/carnithine racemase. | Nitroreductase. | 0.537 |
FcbB2_3 | RMCT_2370 | RMCT_2408 | RMCT_2370 | enoyl-CoA hydratase/carnithine racemase. | Acyl dehydratase. | 0.676 |
FcbB2_3 | RMCT_2407 | RMCT_2408 | RMCT_2407 | enoyl-CoA hydratase/carnithine racemase. | Phenylacetic acid degradation-like protein. | 0.816 |
FcbB2_3 | RMCT_2409 | RMCT_2408 | RMCT_2409 | enoyl-CoA hydratase/carnithine racemase. | Amidohydrolase 2. | 0.680 |
FcbB2_3 | RMCT_2410 | RMCT_2408 | RMCT_2410 | enoyl-CoA hydratase/carnithine racemase. | Dihydrodipicolinate reductase N-terminus domain-containing protein. | 0.513 |
Nox_2 | FcbB2_3 | RMCT_2411 | RMCT_2408 | Nitroreductase. | enoyl-CoA hydratase/carnithine racemase. | 0.537 |
Nox_2 | RMCT_2407 | RMCT_2411 | RMCT_2407 | Nitroreductase. | Phenylacetic acid degradation-like protein. | 0.568 |
Nox_2 | RMCT_2409 | RMCT_2411 | RMCT_2409 | Nitroreductase. | Amidohydrolase 2. | 0.749 |
Nox_2 | RMCT_2410 | RMCT_2411 | RMCT_2410 | Nitroreductase. | Dihydrodipicolinate reductase N-terminus domain-containing protein. | 0.785 |
RMCT_1886 | BaiE_1 | RMCT_1886 | RMCT_4056 | Nuclear transport factor 2. | Hypothetical protein. | 0.735 |
RMCT_1886 | RMCT_2370 | RMCT_1886 | RMCT_2370 | Nuclear transport factor 2. | Acyl dehydratase. | 0.551 |
RMCT_1886 | RMCT_2373 | RMCT_1886 | RMCT_2373 | Nuclear transport factor 2. | Putative uncharacterized protein. | 0.506 |
RMCT_1886 | RMCT_2410 | RMCT_1886 | RMCT_2410 | Nuclear transport factor 2. | Dihydrodipicolinate reductase N-terminus domain-containing protein. | 0.436 |
RMCT_2370 | FcbB2_3 | RMCT_2370 | RMCT_2408 | Acyl dehydratase. | enoyl-CoA hydratase/carnithine racemase. | 0.676 |
RMCT_2370 | RMCT_1886 | RMCT_2370 | RMCT_1886 | Acyl dehydratase. | Nuclear transport factor 2. | 0.551 |
RMCT_2370 | RMCT_2373 | RMCT_2370 | RMCT_2373 | Acyl dehydratase. | Putative uncharacterized protein. | 0.981 |
RMCT_2370 | RMCT_2410 | RMCT_2370 | RMCT_2410 | Acyl dehydratase. | Dihydrodipicolinate reductase N-terminus domain-containing protein. | 0.459 |
RMCT_2373 | RMCT_1886 | RMCT_2373 | RMCT_1886 | Putative uncharacterized protein. | Nuclear transport factor 2. | 0.506 |
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