STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PolS_1Short-chain dehydrogenase/reductase SDR. (261 aa)    
Predicted Functional Partners:
FrmA
adhD.
 
   
 0.816
Lvr_3
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.720
RMCT_1338
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.718
Lvr_5
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.717
RMCT_2415
Receptor ligand binding region family protein.
 
     0.696
RMCT_2404
Transcriptional regulator.
 
     0.678
RMCT_2399
Taurine catabolism dioxygenase TauD, TfdA family.
 
   
 0.673
RMCT_1732
Short-chain dehydrogenase.
 
 
 0.653
HsdA_5
3-alpha-hydroxysteroid dehydrogenase.
 
 
 0.639
HsdA_4
Short-chain type dehydrogenase/reductase.
 
 
 0.632
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.