STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bm3R1TetR family transcriptional regulator. (208 aa)    
Predicted Functional Partners:
PcpB_1
Oxygenase.
 
   
 0.832
EchA8_8
enoyl-CoA hydratase.
  
    0.573
YybR
HxlR family transcriptional regulator.
 
  
 0.565
RMCT_2438
Immunogenic protein MPT63.
       0.547
CysL
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
 
 0.520
RMCT_3156
Transcriptional regulator.
  
  
 0.500
RMCT_2560
AraC family transcriptional regulator.
 
  
 0.486
RMCT_3136
Transcriptional regulatory protein.
  
    0.472
YvdT_1
TetR family transcriptional regulator.
  
    0.466
FecI
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family.
  
  
 0.453
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.