STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PknH_1Extracellular solute-binding protein family 3. (588 aa)    
Predicted Functional Partners:
PstP
Serine/threonine phosphatase ppp.
 
 
 0.907
RMCT_0377
FHA domain-containing protein.
 
 
 
 0.771
RMCT_2460
YVTN family beta-propeller repeat protein.
     
 0.605
RMCT_1095
FHA domain-containing protein.
 
 
 
 0.599
RMCT_1094
FHA domain-containing protein.
 
 
 
 0.563
RMCT_4559
Stage II sporulation protein E.
  
 
 0.560
PknB_1
Transmembrane serine/threonine-protein kinase B pknB.
 
 
0.550
RMCT_2462
Hypothetical protein.
       0.498
ArtM_2
ABC transporter ATP-binding protein.
  
 
 0.484
FtsE_2
Transmembrane ATP-binding protein ABC transporter.
  
 
 0.475
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.