STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lip2_3Esterase lipM. (430 aa)    
Predicted Functional Partners:
RMCT_2464
Putative uncharacterized protein.
       0.732
PpsA_2
Beta-ketoacyl synthase.
  
 
 0.718
FadD_15
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.642
FadK_1
acyl-CoA synthetase.
  
 
 0.642
RMCT_3852
Putative uncharacterized protein.
   
 0.639
Pks2
Polyketide synthase pks5.
  
 
 0.568
FadD_3
fatty-acid--CoA ligase FadD8.
  
 
 0.564
PpsA_7
Polyketide synthase pks13.
  
 
 0.555
BaiE_1
Hypothetical protein.
 
 
 0.548
SipT
Signal peptidase I lepB; Belongs to the peptidase S26 family.
  
 
 0.545
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.