STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FadK_5AMP-dependent synthetase and ligase. (499 aa)    
Predicted Functional Partners:
RMCT_2488
Putative uncharacterized protein.
 
     0.880
PpsA_7
Polyketide synthase pks13.
 
 0.772
Pks2
Polyketide synthase pks5.
 
 0.754
PpsA_2
Beta-ketoacyl synthase.
  
0.753
RMCT_0850
Putative uncharacterized protein.
 
     0.748
EryA_1
Acyl transferase domain-containing protein.
  
 0.744
BioI_2
Cytochrome P450 superfamily protein.
  
  0.741
RMCT_4644
Putative uncharacterized protein.
 
     0.728
RMCT_2208
Putative uncharacterized protein.
 
     0.725
RMCT_4707
Linear gramicidin synthetase subunit D.
 
0.697
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.