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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2499acyl-CoA dehydrogenase domain-containing protein. (385 aa)    
Predicted Functional Partners:
RMCT_2498
acyl-CoA dehydrogenase domain-containing protein.
     0.950
RMCT_2501
acyl-CoA dehydrogenase FadE34.
  
 0.856
RMCT_1920
acyl-CoA dehydrogenase fadE27.
 
 
 0.833
FabG_5
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein.
  
  0.821
RMCT_2500
acyl-CoA dehydrogenase domain-containing protein.
 
    
0.812
RMCT_4533
Putative uncharacterized protein.
 
 0.795
RMCT_4608
acyl-CoA dehydrogenase.
     0.778
RMCT_2168
acyl-CoA dehydrogenase.
     0.777
RMCT_3370
Acyl dehydratase.
 
 0.753
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.745
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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