Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AccB | AccC_1 | RMCT_2511 | RMCT_2510 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Biotin carboxylase. | 0.999 |
| AccB | CfiA | RMCT_2511 | RMCT_2509 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Carboxyltransferase. | 0.978 |
| AccB | CfiB | RMCT_2511 | RMCT_3511 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.552 |
| AccB | MaeB | RMCT_2511 | RMCT_2822 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Malate dehydrogenase. | 0.435 |
| AccB | PpdK | RMCT_2511 | RMCT_2512 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Pyruvate phosphate dikinase PpdK. | 0.824 |
| AccB | Pyk | RMCT_2511 | RMCT_4438 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.573 |
| AccB | RMCT_0836 | RMCT_2511 | RMCT_0836 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | 0.938 |
| AccB | RMCT_0837 | RMCT_2511 | RMCT_0837 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Oxidoreductase subunit alpha. | 0.978 |
| AccB | ppc | RMCT_2511 | RMCT_3621 | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.523 |
| AccC_1 | AccB | RMCT_2510 | RMCT_2511 | Biotin carboxylase. | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.999 |
| AccC_1 | CfiA | RMCT_2510 | RMCT_2509 | Biotin carboxylase. | Carboxyltransferase. | 0.983 |
| AccC_1 | CfiB | RMCT_2510 | RMCT_3511 | Biotin carboxylase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.667 |
| AccC_1 | PpdK | RMCT_2510 | RMCT_2512 | Biotin carboxylase. | Pyruvate phosphate dikinase PpdK. | 0.662 |
| AccC_1 | RMCT_0836 | RMCT_2510 | RMCT_0836 | Biotin carboxylase. | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | 0.913 |
| AccC_1 | RMCT_0837 | RMCT_2510 | RMCT_0837 | Biotin carboxylase. | Oxidoreductase subunit alpha. | 0.934 |
| AceE_1 | CfiA | RMCT_0599 | RMCT_2509 | Pyruvate dehydrogenase E1 component. | Carboxyltransferase. | 0.918 |
| AceE_1 | CfiB | RMCT_0599 | RMCT_3511 | Pyruvate dehydrogenase E1 component. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.918 |
| AceE_1 | MaeB | RMCT_0599 | RMCT_2822 | Pyruvate dehydrogenase E1 component. | Malate dehydrogenase. | 0.915 |
| AceE_1 | PpdK | RMCT_0599 | RMCT_2512 | Pyruvate dehydrogenase E1 component. | Pyruvate phosphate dikinase PpdK. | 0.921 |
| AceE_1 | Pyk | RMCT_0599 | RMCT_4438 | Pyruvate dehydrogenase E1 component. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.940 |
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