STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2532AraC family transcriptional regulator. (280 aa)    
Predicted Functional Partners:
RMCT_1975
DNA-binding domain-containing protein, AraC-type.
  
     0.697
RMCT_2533
Lipase/phospolipase.
  
    0.597
BigR_2
ArsR family transcriptional regulator.
 
  
 0.583
RMCT_3570
arsR family transcriptional regulator.
 
  
 0.540
PafB_1
Helix-turn-helix, type 11 domain-containing protein.
 
    0.530
RhaR
AraC family transcriptional regulator.
 
 
 0.519
YpdC
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
 
 
 0.499
RMCT_1552
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family.
 
  
 0.488
FecI
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family.
 
  
 0.464
RMCT_0661
Activator of Hsp90 ATPase 1 family protein.
 
    0.463
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.