Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DegQ | RMCT_0741 | RMCT_1580 | RMCT_0741 | Trypsin-like serine protease with C-terminal PDZ domain. | 35 kDa alanine rich protein. | 0.465 |
| DegQ | RMCT_3495 | RMCT_1580 | RMCT_3495 | Trypsin-like serine protease with C-terminal PDZ domain. | Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 0.655 |
| DegQ | dnaJ | RMCT_1580 | RMCT_0768 | Trypsin-like serine protease with C-terminal PDZ domain. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.543 |
| DegQ | ftsH | RMCT_1580 | RMCT_3309 | Trypsin-like serine protease with C-terminal PDZ domain. | Cell division protein ftsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.449 |
| DegQ | ftsH-2 | RMCT_1580 | RMCT_4095 | Trypsin-like serine protease with C-terminal PDZ domain. | Protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.415 |
| DegQ | grpE | RMCT_1580 | RMCT_4022 | Trypsin-like serine protease with C-terminal PDZ domain. | GrpE protein HSP-70 cofactor; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of [...] | 0.459 |
| DegQ | htpX | RMCT_1580 | RMCT_2537 | Trypsin-like serine protease with C-terminal PDZ domain. | Heat shock protein HtpX; Belongs to the peptidase M48B family. | 0.672 |
| HepT | dnaJ | RMCT_2538 | RMCT_0768 | Polyprenyl-diphosphate synthase grcC1; Belongs to the FPP/GGPP synthase family. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.482 |
| HepT | htpX | RMCT_2538 | RMCT_2537 | Polyprenyl-diphosphate synthase grcC1; Belongs to the FPP/GGPP synthase family. | Heat shock protein HtpX; Belongs to the peptidase M48B family. | 0.715 |
| RMCT_0741 | DegQ | RMCT_0741 | RMCT_1580 | 35 kDa alanine rich protein. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.465 |
| RMCT_0741 | htpX | RMCT_0741 | RMCT_2537 | 35 kDa alanine rich protein. | Heat shock protein HtpX; Belongs to the peptidase M48B family. | 0.660 |
| RMCT_3495 | DegQ | RMCT_3495 | RMCT_1580 | Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.655 |
| RMCT_3495 | dnaJ | RMCT_3495 | RMCT_0768 | Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.531 |
| RMCT_3495 | htpX | RMCT_3495 | RMCT_2537 | Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | Heat shock protein HtpX; Belongs to the peptidase M48B family. | 0.630 |
| clpB | dnaJ | RMCT_4012 | RMCT_0768 | Endopeptidase ATP binding protein subunit B clpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.861 |
| clpB | grpE | RMCT_4012 | RMCT_4022 | Endopeptidase ATP binding protein subunit B clpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | GrpE protein HSP-70 cofactor; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of [...] | 0.985 |
| clpB | htpX | RMCT_4012 | RMCT_2537 | Endopeptidase ATP binding protein subunit B clpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | Heat shock protein HtpX; Belongs to the peptidase M48B family. | 0.730 |
| clpB | infB | RMCT_4012 | RMCT_4289 | Endopeptidase ATP binding protein subunit B clpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.497 |
| dnaJ | DegQ | RMCT_0768 | RMCT_1580 | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | Trypsin-like serine protease with C-terminal PDZ domain. | 0.543 |
| dnaJ | HepT | RMCT_0768 | RMCT_2538 | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | Polyprenyl-diphosphate synthase grcC1; Belongs to the FPP/GGPP synthase family. | 0.482 |
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