Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CcsBCytochrome c assembly protein. (331 aa)    
Predicted Functional Partners:
RMCT_2598
Transmembrane protein.
 
  
 0.993
CcdA
Cytochrome c biogenesis protein, transmembrane region.
 
  
 0.993
ResA_1
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen.
 
  
 0.993
hemL
Glutamate-1-semialdehyde aminotransferase.
 
  
 0.943
RMCT_2601
Fructose-2,6-bisphosphatase.
  
    0.920
CysG_1
uroporphyrin-III C-methyltransferase hemD.
 
  
 0.864
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.709
CysG_2
Multi-functional enzyme siroheme synthase cysG: uroporphyrin-III C-methyltransferase + precorrin-2 oxidase + ferrochelatase.
  
  
 0.680
QcrB
Ubiquinol-cytochrome c reductase cytochrome b subunit.
 
  
 0.632
RMCT_2603
Protein of unknown function.
       0.630
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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