Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RMCT_2603Protein of unknown function. (130 aa)    
Predicted Functional Partners:
CcdA
Cytochrome c biogenesis protein, transmembrane region.
       0.665
ResA_1
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen.
       0.665
RMCT_2598
Transmembrane protein.
       0.651
CcsB
Cytochrome c assembly protein.
       0.630
RMCT_2601
Fructose-2,6-bisphosphatase.
       0.629
hemL
Glutamate-1-semialdehyde aminotransferase.
       0.629
RMCT_2604
Deazaflavin-dependent nitroreductase family protein.
       0.573
RMCT_2609
Putative uncharacterized protein.
  
     0.488
RMCT_2466
Putative uncharacterized protein.
  
     0.463
RMCT_0121
Phage integrase family protein.
  
     0.403
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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