Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AcoB | RamA | RMCT_1637 | RMCT_2643 | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit. | Amidohydrolase. | 0.615 |
Gbh | RamA | RMCT_2031 | RMCT_2643 | Agmatinase; Belongs to the arginase family. | Amidohydrolase. | 0.670 |
PepN | Pgm | RMCT_0848 | RMCT_3364 | Aminopeptidase N pepN. | Phosphoglucomutase. | 0.641 |
PepN | RamA | RMCT_0848 | RMCT_2643 | Aminopeptidase N pepN. | Amidohydrolase. | 0.607 |
Pgm | PepN | RMCT_3364 | RMCT_0848 | Phosphoglucomutase. | Aminopeptidase N pepN. | 0.641 |
Pgm | RMCT_3367 | RMCT_3364 | RMCT_3367 | Phosphoglucomutase. | Protein of unknown function. | 0.641 |
Pgm | RMCT_3884 | RMCT_3364 | RMCT_3884 | Phosphoglucomutase. | Putative uncharacterized protein. | 0.639 |
Pgm | RamA | RMCT_3364 | RMCT_2643 | Phosphoglucomutase. | Amidohydrolase. | 0.614 |
RMCT_2640 | RMCT_2642 | RMCT_2640 | RMCT_2642 | Lipoprotein lprQ. | Protein of unknown function. | 0.740 |
RMCT_2640 | RMCT_2644 | RMCT_2640 | RMCT_2644 | Lipoprotein lprQ. | Putative uncharacterized protein. | 0.656 |
RMCT_2640 | RamA | RMCT_2640 | RMCT_2643 | Lipoprotein lprQ. | Amidohydrolase. | 0.612 |
RMCT_2640 | murB | RMCT_2640 | RMCT_2641 | Lipoprotein lprQ. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.845 |
RMCT_2642 | RMCT_2640 | RMCT_2642 | RMCT_2640 | Protein of unknown function. | Lipoprotein lprQ. | 0.740 |
RMCT_2642 | RMCT_2644 | RMCT_2642 | RMCT_2644 | Protein of unknown function. | Putative uncharacterized protein. | 0.780 |
RMCT_2642 | RamA | RMCT_2642 | RMCT_2643 | Protein of unknown function. | Amidohydrolase. | 0.717 |
RMCT_2642 | murB | RMCT_2642 | RMCT_2641 | Protein of unknown function. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.653 |
RMCT_2644 | RMCT_2640 | RMCT_2644 | RMCT_2640 | Putative uncharacterized protein. | Lipoprotein lprQ. | 0.656 |
RMCT_2644 | RMCT_2642 | RMCT_2644 | RMCT_2642 | Putative uncharacterized protein. | Protein of unknown function. | 0.780 |
RMCT_2644 | RamA | RMCT_2644 | RMCT_2643 | Putative uncharacterized protein. | Amidohydrolase. | 0.883 |
RMCT_2644 | murB | RMCT_2644 | RMCT_2641 | Putative uncharacterized protein. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.751 |
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