Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MetN2ABC transporter-like protein. (257 aa)    
Predicted Functional Partners:
OppC_1
Dipeptide/oligopeptide/nickel ABC transporter permease.
 0.999
DdpC
Dipeptide/oligopeptide/nickel ABC transporter permease.
 0.999
GsiC_1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component.
 
 0.998
AppA
Peptide ABC transporter periplasmic protein.
 
 0.995
GsiC_2
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.994
OppC_2
Oligopeptide-transport integral membrane protein ABC transporter oppC.
 
 0.992
ArtM_1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
  
0.992
DppA
Extracellular solute-binding protein.
 
 0.983
GsiA_1
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
 
0.966
RMCT_3730
Extracellular solute-binding protein.
  
 0.961
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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