Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AppA | ArtM_1 | RMCT_2665 | RMCT_2661 | Peptide ABC transporter periplasmic protein. | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | 0.929 |
AppA | GsiC_1 | RMCT_2665 | RMCT_2664 | Peptide ABC transporter periplasmic protein. | ABC-type dipeptide/oligopeptide/nickel transport systems, permease component. | 0.980 |
AppA | Lpd | RMCT_2665 | RMCT_2660 | Peptide ABC transporter periplasmic protein. | Dihydrolipoamide dehydrogenase. | 0.676 |
AppA | MetN2 | RMCT_2665 | RMCT_2662 | Peptide ABC transporter periplasmic protein. | ABC transporter-like protein. | 0.945 |
AppA | OppC_1 | RMCT_2665 | RMCT_2663 | Peptide ABC transporter periplasmic protein. | Dipeptide/oligopeptide/nickel ABC transporter permease. | 0.981 |
AppA | RMCT_2659 | RMCT_2665 | RMCT_2659 | Peptide ABC transporter periplasmic protein. | Putative uncharacterized protein. | 0.631 |
AppA | RMCT_2666 | RMCT_2665 | RMCT_2666 | Peptide ABC transporter periplasmic protein. | Putative uncharacterized protein. | 0.668 |
AppA | RMCT_2667 | RMCT_2665 | RMCT_2667 | Peptide ABC transporter periplasmic protein. | Hydrophobic protein. | 0.668 |
AppA | RMCT_2668 | RMCT_2665 | RMCT_2668 | Peptide ABC transporter periplasmic protein. | Hypothetical protein. | 0.488 |
AppA | ThcA | RMCT_2665 | RMCT_2669 | Peptide ABC transporter periplasmic protein. | Eptc-inducible aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.524 |
ArtM_1 | AppA | RMCT_2661 | RMCT_2665 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | Peptide ABC transporter periplasmic protein. | 0.929 |
ArtM_1 | GsiC_1 | RMCT_2661 | RMCT_2664 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | ABC-type dipeptide/oligopeptide/nickel transport systems, permease component. | 0.918 |
ArtM_1 | Lpd | RMCT_2661 | RMCT_2660 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | Dihydrolipoamide dehydrogenase. | 0.631 |
ArtM_1 | MetN2 | RMCT_2661 | RMCT_2662 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | ABC transporter-like protein. | 0.992 |
ArtM_1 | OppC_1 | RMCT_2661 | RMCT_2663 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | Dipeptide/oligopeptide/nickel ABC transporter permease. | 0.948 |
ArtM_1 | RMCT_2659 | RMCT_2661 | RMCT_2659 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | Putative uncharacterized protein. | 0.631 |
ArtM_1 | RMCT_2666 | RMCT_2661 | RMCT_2666 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | Putative uncharacterized protein. | 0.668 |
ArtM_1 | RMCT_2667 | RMCT_2661 | RMCT_2667 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | Hydrophobic protein. | 0.668 |
ArtM_1 | RMCT_2668 | RMCT_2661 | RMCT_2668 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | Hypothetical protein. | 0.488 |
ArtM_1 | ThcA | RMCT_2661 | RMCT_2669 | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. | Eptc-inducible aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.488 |
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