Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_2670Serine protease, S9A family peptidase. (702 aa)    
Predicted Functional Partners:
RebM_1
Ubiquinone/menaquinone biosynthesis methyltransferase.
       0.664
ThcA
Eptc-inducible aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.620
RMCT_2668
Hypothetical protein.
       0.600
PepO
Zinc metalloprotease.
 
  
 0.573
RMCT_2659
Putative uncharacterized protein.
       0.492
Lpd
Dihydrolipoamide dehydrogenase.
     
 0.480
RMCT_2672
Hypothetical protein.
       0.480
RMCT_2666
Putative uncharacterized protein.
       0.462
RMCT_2667
Hydrophobic protein.
       0.462
AppA
Peptide ABC transporter periplasmic protein.
     
 0.441
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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