Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RebM_1Ubiquinone/menaquinone biosynthesis methyltransferase. (220 aa)    
Predicted Functional Partners:
RMCT_2670
Serine protease, S9A family peptidase.
       0.664
RMCT_2672
Hypothetical protein.
       0.551
ThcA
Eptc-inducible aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.537
HepT
Polyprenyl-diphosphate synthase grcC1; Belongs to the FPP/GGPP synthase family.
 
 
 0.500
RMCT_2668
Hypothetical protein.
       0.497
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.437
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.434
IspB
Geranylgeranyl pyrophosphate synthetase idsA2; Belongs to the FPP/GGPP synthase family.
  
 
 0.427
GalE_3
NAD-dependent epimerase/dehydratase.
 
  
 0.419
GsiC_1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component.
  
  
 0.414
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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