Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
YhjE_1Major facilitator superfamily transporter. (456 aa)    
Predicted Functional Partners:
HmuT
ABC transporter substrate-binding protein.
  
    0.582
YusV_1
ABC transporter ATP-binding protein.
  
    0.504
RMCT_2681
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.495
RMCT_0516
HAD-superfamily hydrolase.
  
  
 0.465
RMCT_1290
Hydrolase.
  
  
 0.465
RMCT_3942
HAD superfamily hydrolase.
  
  
 0.465
ProP_1
General substrate transporter major facilitator superfamily.
 
  
0.457
ProP_2
Arabinose efflux permease family protein.
 
  
0.451
CobU_1
Bifunctional cobalamin biosynthesis protein CobU.
       0.432
XylE
MFS transporter, sugar porter family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
  
 0.425
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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