Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2688Transmembrane protein. (495 aa)    
Predicted Functional Partners:
RMCT_2689
Membrane flanked domain-containing protein.
 
  
 0.982
FabG_3
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.647
NagD
HAD family hydrolase.
       0.614
MoeA_1
Molybdopterin biosynthesis protein moeA2; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.589
RMCT_0610
Integral membrane sensor signal transduction histidine kinase.
 
     0.573
EccD1
Transmembrane protein.
  
     0.571
EccE1
Predicted protein.
  
     0.571
EspB_1
Uncharacterized protein.
 
     0.567
RMCT_0250
Transmembrane protein.
 
     0.558
PcrA_2
ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
 
     0.558
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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