STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_2720Alpha/beta hydrolase superfamily enzyme, predicted hydrolase. (209 aa)    
Predicted Functional Partners:
ThiD
Phosphomethylpyrimidine kinase.
  
    0.817
RMCT_2721
Putative uncharacterized protein.
       0.775
RMCT_0082
Lipoprotein.
   
    0.614
RMCT_3503
OsmC family protein.
     
 0.572
RMCT_2719
Putative uncharacterized protein.
       0.530
thiC
Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
       0.508
RMCT_2718
Putative uncharacterized protein.
       0.475
RMCT_1047
Proline and alanine rich protein.
     
 0.439
LigC
ATP-dependent DNA ligase.
 
     0.437
RMCT_0669
Chlorite dismutase.
      
 0.410
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.