Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PknE_1Putative uncharacterized protein. (226 aa)    
Predicted Functional Partners:
RMCT_3512
Integral membrane protein.
 
  
 0.565
RMCT_2723
Putative uncharacterized protein.
       0.545
ResA_1
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen.
  
 
 0.523
SteT_1
Amino acid permease-associated protein.
       0.506
RMCT_0198
RDD domain-containing protein.
 
     0.489
RMCT_3075
Conserved alanine and proline rich protein.
 
  
 0.456
RMCT_3168
Transcriptional regulator.
 
  
 0.435
RMCT_4034
Molecular chaperone.
 
  
 0.433
RMCT_1425
Putative uncharacterized protein.
  
     0.429
EccB1_2
Type VII secretion protein EccB, Actinobacterial.
 
  
 0.428
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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