STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DrrA_1ABC transporter ATP-binding protein. (307 aa)    
Predicted Functional Partners:
RMCT_2726
ABC transporter transmembrane protein.
 
     0.935
RMCT_2725
Lipoprotein aminopeptidase lpqL.
     
 0.718
MsbA
ABC transporter.
 
0.699
RMCT_1746
ABC transporter.
 
0.695
IrtA
Drug ABC transporter ATP-binding protein.
 
0.693
RMCT_1747
ABC transporter-like protein.
 
0.692
RMCT_1389
Drug ABC transporter ATP-binding protein.
  
0.676
YheH
ABC transporter.
  
0.676
RMCT_2730
Thiamine biosynthesis oxidoreductase thiO.
     
 0.675
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
       0.653
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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