Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCT_2736Putative uncharacterized protein. (291 aa)    
Predicted Functional Partners:
Mce4A
MCE-family protein mce4A.
  
    0.536
GltB
Ferredoxin-dependent glutamate synthase, large subunit gltB.
  
    0.506
RMCT_0404
Hypothetical protein.
  
     0.499
RMCT_2713
Conserved protein of unknown function.
 
     0.490
RMCT_3680
13e12 repeat-containing protein.
 
     0.489
RMCT_0741
35 kDa alanine rich protein.
  
    0.488
RMCT_0699
Hypothetical protein.
  
     0.465
RMCT_0003
Putative uncharacterized protein.
  
     0.461
RMCT_2559
MCE-family protein MCE1a.
  
    0.453
RMCT_0906
Hypothetical protein.
 
    0.447
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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